BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB032C05LP1|AL429539
(914 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1498 1812 0.0
>3x_Contig1498
Length = 12634
Score = 1812 bits (914), Expect = 0.0
Identities = 914/914 (100%)
Strand = Plus / Plus
Query: 1 gatcccatgaggagcggaattacccgctattgtcctctccaaccaggacccaccagtttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 gatcccatgaggagcggaattacccgctattgtcctctccaaccaggacccaccagtttc 424
Query: 61 ttgtgtctttagctttccctcactcaagcgaaagaggttttcctccttatcgcttatttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 ttgtgtctttagctttccctcactcaagcgaaagaggttttcctccttatcgcttatttc 484
Query: 121 ccttacgttaagcggattttcccttttgggataccactaagctcagttcccttttggcgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 ccttacgttaagcggattttcccttttgggataccactaagctcagttcccttttggcgc 544
Query: 181 tgggattctcttgagataagtgaatcgagttaccagaaacggacagtgtgaggatgaatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 tgggattctcttgagataagtgaatcgagttaccagaaacggacagtgtgaggatgaatt 604
Query: 241 ctgtgttgcaatcagctcggcaagttgacccttacgcagctctctttagaccccattagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 ctgtgttgcaatcagctcggcaagttgacccttacgcagctctctttagaccccattagt 664
Query: 301 ttgccggttcaatcttggaatcgcgccaatgcaagctagctgggactttttcactcattg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 ttgccggttcaatcttggaatcgcgccaatgcaagctagctgggactttttcactcattg 724
Query: 361 taaactcttcctttttcactattatcttatctcgggaatatcattccaaaggacctatgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 taaactcttcctttttcactattatcttatctcgggaatatcattccaaaggacctatgc 784
Query: 421 ccatttaatagcgacataacgattatttgaacctcaaatgatggctgcataggaggtgtg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 785 ccatttaatagcgacataacgattatttgaacctcaaatgatggctgcataggaggtgtg 844
Query: 481 atttggagtagagagaagaggtaaagatatacatatataaaggatacttagtcaaacctt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 845 atttggagtagagagaagaggtaaagatatacatatataaaggatacttagtcaaacctt 904
Query: 541 tggtgtgaatattagtttctgtgatgtattcttgtcatttaagacaaatcaatcaccaag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 905 tggtgtgaatattagtttctgtgatgtattcttgtcatttaagacaaatcaatcaccaag 964
Query: 601 ctgcagcttaccattatttccccagatgacgtacttaacagaaaacccagaaaagtttaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 965 ctgcagcttaccattatttccccagatgacgtacttaacagaaaacccagaaaagtttaa 1024
Query: 661 acaataccaagtcaaggttgatgcctataacaacgaaagagaggatcagatcaaggcgtt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1025 acaataccaagtcaaggttgatgcctataacaacgaaagagaggatcagatcaaggcgtt 1084
Query: 721 tgatgctgactttgcggctaaatgtgaggaattaattccagctgcagaagttttggattc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1085 tgatgctgactttgcggctaaatgtgaggaattaattccagctgcagaagttttggattc 1144
Query: 781 agaaccactcgaaggtttacaatttctaggccaacttctaaacaaacaggaacaacagat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1145 agaaccactcgaaggtttacaatttctaggccaacttctaaacaaacaggaacaacagat 1204
Query: 841 agttaacgattataccattaaagatttggttgagaaacaagtatctggtgaattgactgc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1205 agttaacgattataccattaaagatttggttgagaaacaagtatctggtgaattgactgc 1264
Query: 901 cgttgaaattacta 914
||||||||||||||
Sbjct: 1265 cgttgaaattacta 1278
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6384
Number of Sequences: 1807
Number of extensions: 6384
Number of successful extensions: 45
Number of sequences better than 1.0e-20: 1
length of query: 914
length of database: 10,358,551
effective HSP length: 16
effective length of query: 898
effective length of database: 10,329,639
effective search space: 9276015822
effective search space used: 9276015822
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)